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SRX13865596: GSM5830492: heart: 100; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 44.6M spots, 4.4G bases, 1.4Gb downloads

Submitted by: NCBI (GEO)
Study: Heart profiling in HMDP (high-fat/high-sucrose diet)
PRJNA799591 • SRP356263 • All experiments • All runs
show Abstracthide Abstract
Identify genes in the heart whose expression is under genetic regulation in the Hybrid Mouse Diversity Panel (HMDP). The HMDP comprises classical inbred and recombinant inbred wild type mice. The TPM values of genes were used for genome wide association. These data are used to identify candidate genes at loci associated with cardiovascular traits. Overall design: GWAS for gene expression in heart in inbred strains fed chow diet for 8 weeks followed by high-fat/high-sucrose diet for 8 weeks
Sample: heart: 100
SAMN25182024 • SRS11739620 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA from mouse heart samples (one mouse per strain) was purified using the Qiagen miRNeasy kit (Qiagen cat#217004) per the manufacturer's instructions. Libraries were prepared using the Nugen Universal Plus mRNA kit (Tecan Genomics Inc, Redwood City, CA)
Experiment attributes:
GEO Accession: GSM5830492
Links:
Runs: 1 run, 44.6M spots, 4.4G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR1770255144,629,9284.4G1.4Gb2022-02-01

ID:
19322740

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